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Training

An important part of the CLIMB-BIG-DATA remit is to provide training events including workshops, hackathons and meetings to train and strengthen the microbial bioinformatics community.


Bioinformatics Training Centres

Two new training centres were purpose-built at Warwick and Swansea. In addition the Centre for Computational Biology at Birmingham was upgraded with CLIMB funds. All the centres will hold CLIMB-BIG-DATA workshops and meetings. 


Community forum

We are proud to give technical assistance and to provide tutorials through our CLIMB-BIG-DATA community forum.

This forum is for users of the CLIMB-BIG-DATA system and is the place to find documentation about the system and step-by-step tutorials. It is also the place to find updates about the service. We hope that it will become a community forum for people to share pipelines, data, experiences etc. with the UK microbiology community and to seek and provide help from other CLIMB-BIG-USERS users and administrators.


Tutorials available through the community forum

Some of the tutorials available are pasted here below. For a full list, please refer to the online CLIMB-BIG-DATA Community Forum.

Creating and attaching volumes using Horizon
Nullarbor Tutorial: Automated bacterial sequence mapping, variant calling, MLST assignation and resistance screening
Ancient DNA – Mark Pallen
Using volume snapshots to duplicate or backup an instance
Metagenomics – Chris Quince
EDGE Tutorial: Green Vervet S. aureus
Running EDGE using an example dataset

Training Events